Yes, God is fully aware of all your inner thoughts and doubts. Divine knowledge encompasses everything that passes through hearts and breasts, even the most hidden whispers, and He has complete mastery over it.
To answer the profound and compassionate question, "Does God even see my doubts?", one can affirm with absolute certainty: Yes, Almighty God not only sees and knows your doubts, but He is absolutely aware of all your thoughts, feelings, intentions, and even the most hidden inner whispers, whether manifest or concealed. This truth is one of the fundamental tenets of Tawhid (Oneness of God) and the understanding of God in Islam, built upon divine attributes such as absolute knowledge (Al-Alim), complete encompassment (Al-Muhit), infinite life (Al-Hayy), and absolute hearing (Al-Sami'). Allah repeatedly emphasizes in the Holy Quran His boundless knowledge over everything in the heavens and on earth, and what is hidden in the breasts. Divine knowledge has no limits, is not confined by time or space, and is aware of every particle, every hidden thought, and every unspoken feeling. This knowledge not only includes our outward actions but also encompasses everything that transpires in the solitude of our minds and hearts, including doubts, whispers, fears, and hopes. Indeed, God is the Creator of these very thoughts and hearts; how could He then be unaware of His own creation? The Holy Quran beautifully and eloquently articulates this truth. For instance, in Surah Qaf, verse 16, it states: "And We have already created man and know what his soul whispers to him, and We are closer to him than [his] jugular vein." This verse clearly indicates that even the subtle murmurs and hidden whispers of our minds and souls, which we ourselves may barely perceive, are manifest to God. God's closeness, "closer than the jugular vein," is a metaphor for His absolute presence and complete knowledge of the inner being of man. He knows not only what we say or do, but also what we think, what we feel, and what doubts we harbor in our hearts. Furthermore, in Surah Al-Mulk, verse 13, it is stated: "And conceal your speech or publicize it; indeed, He is Knowing of that within the breasts." This verse further confirms the truth that God is aware of all secrets and hidden matters of the heart. Doubts, like other thoughts and emotions, are considered part of "that within the breasts" (Dhat al-Sudur). Therefore, concealing them from God is meaningless, as nothing remains hidden from His knowledge. This absolute awareness is a source of comfort for believers, as they know that their Lord is fully cognizant of their inner struggles and intellectual challenges. Experiencing doubt on the path of faith, especially in today's world filled with various ambiguities and information, is a natural and human phenomenon. Many individuals encounter doubts at some point in their lives. What matters is a person's reaction to these doubts. Do these doubts lead to distancing from truth, or do they serve as an impetus for deeper inquiry and reaching a stronger conviction? God, who is aware of these doubts, knows well whether they stem from a satanic whisper intended for deviation or from sincere and pure questions that drive an individual to deeper contemplation and reflection on divine verses and signs of creation. In fact, many prophets and divine saints also faced challenges and questions at certain points, which ultimately led to an increase in their certainty and knowledge. This demonstrates that God is merciful and understands these kinds of internal struggles. Another verse that refers to this concept is Surah Taha, verse 7: "And if you speak aloud, then indeed, He knows the secret and what is even more hidden." The word "akfa" (more hidden) refers to the deepest layers of the human mind and soul, where perhaps even a person himself is not fully aware of everything, but God is fully cognizant of it. This includes subconscious thoughts, hidden motives, and doubts that have not even fully formed in the mind. This verse assures us that even our most subtle and obscure doubts are not hidden from Him. God's awareness of our doubts and hidden thoughts has two important implications: Firstly, it gives a person a sense of not being alone and being understood. This in itself is comforting to know that your Creator not only sees you but also knows the innermost recesses of your being. This complete knowledge allows a person to speak honestly and openly with their Lord, to pray, and to seek help and guidance. Secondly, this awareness serves as a constant reminder that nothing escapes divine accounting. This does not mean that every doubt is considered a sin, but rather it is a reminder that our intentions and efforts to reach the truth, even amidst doubts, are preserved with God and will be rewarded. If we sincerely and wholeheartedly seek answers to our doubts, God Himself will be our helper, for He Himself has said: "And whoever strives, only strives for [the benefit of] himself. Indeed, Allah is free from need of the worlds" (Al-Ankabut 29:6). This means our striving benefits us. Ultimately, recognizing the truth that God is aware of our doubts can lead us towards deeper contemplation of the Quran's verses, reflection on creation, and seeking knowledge from scholars to resolve ambiguities. Doubts can be a bridge to stronger certainty, provided they are pursued with a spirit of inquiry and honesty, not with the aim of rejecting truth or obstinacy. Assurance of God's absolute knowledge brings peace to the heart and increases reliance on God, as we know that He is not only aware of our problems but is also the best solution-giver and guide.
And We have already created man and know what his soul whispers to him, and We are closer to him than [his] jugular vein.
And conceal your speech or publicize it; indeed, He is Knowing of that within the breasts.
And if you speak aloud, then indeed, He knows the secret and what is even more hidden.
It is mentioned in Sa'di's Golestan that a pious man would stand for prayer every night, supplicating with such humility and earnestness that it seemed no doubt or uncertainty had ever entered his heart. Yet, in his solitude, sometimes disturbing thoughts and unanswered questions would trouble him. One night, amidst his prayers, he pondered whether these hidden thoughts remained concealed from his Lord. At that moment, an inner voice spoke to him: "O servant! You have adorned your body with prayer and opened your tongue with remembrance, but do you suppose your Lord looks only at outward deeds? He is the Creator of hearts and is aware of all that passes in the depths of your soul, even the most hidden whispers and the subtlest doubts. So turn to Him with heart and soul, and reveal all that you harbor within your breast, for He is the All-Hearing, the All-Knowing." The pious man trembled at these words and understood that the Merciful God saw and heard him even in silence and doubt, and this realization brought deep peace and assurance to his heart.